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Gnosis Research Center (GRC)

AGENTTOOLKIT

Talk to Data, Devices, Apps
Science Skill for Agents

Install in Seconds Explore Servers Star on GitHub

Agent Toolkit provides comprehensive science capabilities for AI agents.
v1.0.0 (Beta Public Release - November 11, 2025) launches with 150+ tools across 15+ MCP servers for scientific computing.
Works with Claude Code, Cursor, VS Code, Gemini CLI, Codex CLI, OpenCode and other clients.

Data Formats

Give your AI agents the ability to read and explore scientific file formats. They can navigate HDF5 hierarchies, inspect ADIOS simulation outputs, and process Parquet columnar data. Your agents understand real research data, not just CSV files.

Data Analytics

Turn AI agents into research support tools that accelerate discovery. They can search ArXiv papers, analyze Pandas tabular datasets, generate Matplotlib visualizations, and compile citations. Your agents handle the tedious parts of research.

HPC Resources

Equip AI agents to operate HPC clusters and manage computational resources. They can submit jobs to Slurm, load environment modules, monitor Darshan I/O performance, and orchestrate Jarvis workflows. Your agents become cluster operators.

Featured MCPs

COMMUNITYdata29 TOOLSPOPULAR

Jarvis

v1.0.0·Star on Github

Create pipelines. Build environments. Configure packages. Run workflows. 27 tools for data pipeline management. Jarvis-CD integration for HPC.

Try it out now in your favorite Agent

flagshipv2.0data27 TOOLSPOPULAR

Hdf5

v1.0.0·Star on Github

Read HDF5 files. Explore datasets. Extract data. AI-powered insights. Parallel batch ops (4-8x faster). LRU cache (1000x faster). 27 tools for scientific HDF5 data.

Try it out now in your favorite Agent

COMMUNITYanalysis20 TOOLSPOPULAR

Darshan

v1.0.0·Star on Github

Load logs. Analyze I/O patterns. Identify bottlenecks. Performance metrics. Compare runs. 10 tools for I/O profiling. Darshan log analysis via AI.

Try it out now in your favorite Agent

datadata15 TOOLSPOPULAR

Pandas

v1.0.0·Star on Github

Load CSV/Excel/Parquet. Statistical analysis. Data cleaning. Correlations. Groupby operations. Time series. 15 tools for tabular data. Pandas through natural language.

Try it out now in your favorite Agent

researchdata13 TOOLSPOPULAR

Arxiv

v1.0.0·Star on Github

Search papers. Download PDFs. Export BibTeX. Find by author, title, date, subject. 13 tools for academic research. ArXiv.org integration through AI.

Try it out now in your favorite Agent

COMMUNITYdata13 TOOLSPOPULAR

Parallel-Sort

v1.0.0·Star on Github

Sort massive log files. Parallel processing. Pattern detection. Time-range filtering. Export JSON/CSV. 13 tools for large file operations.

Try it out now in your favorite Agent

Browse All Servers

Formats • Analytics • HPC • Performance • Research • Utilities

All (16)

⏰

data

Chronolog

Start logging sessions. Record AI interactions. Stop and save. Retrieve historical data. 4 tools for distributed logging on HPC systems.

💻

analysis

Node-Hardware

CPU info. Memory stats. GPU details. Disk usage. Network metrics. 11 tools for hardware monitoring. Real-time system analysis.

📦

system

Lmod

Load modules. Swap environments. Save collections. Spider search. 10 tools for environment module management on HPC clusters.

📄

data

Arxiv

Search papers. Download PDFs. Export BibTeX. Find by author, title, date, subject. 13 tools for academic research. ArXiv.org integration through AI.

⚡

analysis

Darshan

Load logs. Analyze I/O patterns. Identify bottlenecks. Performance metrics. Compare runs. 10 tools for I/O profiling. Darshan log analysis via AI.

🐼

data

Pandas

Load CSV/Excel/Parquet. Statistical analysis. Data cleaning. Correlations. Groupby operations. Time series. 15 tools for tabular data. Pandas through natural language.

📋

data

Parquet

Read columnar data. Write Parquet files. Schema inspection. Pandas integration. Efficient for large datasets. Apache Parquet format operations.

🗜️

util

Compression

Compress files with GZIP. Reduce storage. Fast compression. Decompress archives. 1 simple tool for file compression operations.

🗂️

data

Hdf5

Read HDF5 files. Explore datasets. Extract data. AI-powered insights. Parallel batch ops (4-8x faster). LRU cache (1000x faster). 27 tools for scientific HDF5 data.

📊

data

Adios

Read BP5 files. Inspect variables. Check attributes. Read at timestep. 5 tools for ADIOS2 scientific data I/O.

🔄

data

Parallel-Sort

Sort massive log files. Parallel processing. Pattern detection. Time-range filtering. Export JSON/CSV. 13 tools for large file operations.

🖥️

system

Slurm

Submit jobs. Check status. Allocate nodes. Read output. Full HPC cluster management through AI assistants. 13 tools for Slurm workload manager.

🔧

data

Ndp

List organizations. Search datasets. Get metadata. Discover research data through CKAN API. 3 tools for dataset discovery and exploration.

📈

data

Plot

Generate line plots. Create bar charts. Scatter visualizations. Histograms and heatmaps. 6 plotting tools for CSV data visualization through AI.

🔬

scientific

ParaView

Load scientific data. Generate isosurfaces. Create data slices. Volume rendering. Flow streamlines. 12 tools for 3D scientific visualization with ADIOS2/BP5 support.

🤖

data

Jarvis

Create pipelines. Build environments. Configure packages. Run workflows. 27 tools for data pipeline management. Jarvis-CD integration for HPC.